Basic Information
Locus ID:
pistato.v30122230
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
disease resistance
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr15 | 8864596 | 8875216 | + | pistato.v30122230 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.79 | 102,414.32 Da | 45.18 | 99.42 | -0.29 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00931 | NB-ARC domain | 166 | 396 | 9.1E-37 | IPR002182 |
| SUPERFAMILY | SSF52058 | L domain-like | 493 | 853 | 1.3E-25 | - |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 150 | 431 | 1.65E-39 | IPR027417 |
| Gene3D | G3DSA:1.10.8.430 | - | 331 | 415 | 2.0E-15 | IPR042197 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 541 | 864 | 1.7E-33 | IPR032675 |
| Gene3D | G3DSA:3.40.50.300 | - | 150 | 328 | 3.1E-26 | IPR027417 |
| PRINTS | PR00364 | Disease resistance protein signature | 181 | 196 | 6.4E-16 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 835 | 851 | 6.4E-16 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 273 | 287 | 6.4E-16 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 365 | 379 | 6.4E-16 | - |
| Coils | Coil | Coil | 34 | 96 | - | - |
| Coils | Coil | Coil | 452 | 482 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G27190.1 | NB-ARC domain-containing disease resistance protein. | 0 |
| RefSeq | XP_031254299.1 | disease resistance protein At4g27190-like [Pistacia vera] | 0 |
| Q9T048 | Disease resistance protein At4g27190 OS=Arabidopsis thaliana OX=3702 GN=At4g27190 PE=2 SV=1 | 0 | |
| TrEMBL | V4T8H5 | AAA domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10018706mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Anacardiaceae | Pistacia vera | 40 | pistato.v30030420, pistato.v30098710, pistato.v30098730 ... |