Basic Information
Locus ID:
pistato.v30122180
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
disease resistance
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr15 | 8780043 | 8795305 | + | pistato.v30122180 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.63 | 125,155.83 Da | 41.60 | 93.86 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00931 | NB-ARC domain | 175 | 384 | 8.5E-45 | IPR002182 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 168 | 417 | 1.16E-43 | IPR027417 |
| SUPERFAMILY | SSF52058 | L domain-like | 509 | 908 | 2.27E-28 | - |
| Gene3D | G3DSA:1.10.8.430 | - | 318 | 408 | 1.3E-16 | IPR042197 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 492 | 714 | 3.1E-26 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 733 | 927 | 1.1E-7 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 934 | 1071 | 1.6E-6 | IPR032675 |
| Gene3D | G3DSA:3.40.50.300 | - | 144 | 314 | 1.3E-27 | IPR027417 |
| PRINTS | PR00364 | Disease resistance protein signature | 260 | 274 | 1.1E-20 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 630 | 646 | 1.1E-20 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 352 | 366 | 1.1E-20 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 187 | 202 | 1.1E-20 | - |
| Coils | Coil | Coil | 442 | 462 | - | - |
| Coils | Coil | Coil | 33 | 99 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G27190.1 | NB-ARC domain-containing disease resistance protein. | 0 |
| RefSeq | XP_031255412.1 | uncharacterized protein LOC116113399 [Pistacia vera] | 0 |
| Q9T048 | Disease resistance protein At4g27190 OS=Arabidopsis thaliana OX=3702 GN=At4g27190 PE=2 SV=1 | 0 | |
| TrEMBL | A0A067DPT4 | AAA domain-containing protein (Fragment) OS=Citrus sinensis OX=2711 GN=CISIN_1g037851mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Anacardiaceae | Pistacia vera | 40 | pistato.v30030420, pistato.v30098710, pistato.v30098730 ... |