HalophFGD

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Basic Information
Locus ID: pistato.v30122020
Species & Taxonomic ID: Pistacia vera & 55513
Genome Assembly: GWHBKLD00000000
Description: ADP binding
Maps and Mapping Data
Chromosome Start End Strand ID
chr15 8607503 8608656 - pistato.v30122020
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
8.64 11,501.29 Da 31.60 94.55 -0.37
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF00931 NB-ARC domain 2 89 1.5E-10 IPR002182
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases 2 91 5.01E-8 IPR027417
Gene3D G3DSA:3.40.50.300 - 1 94 2.1E-10 IPR027417
Gene Ontology
Molecular Function:
GO:0043531 (ADP binding)
KEGG Pathway
KO Term:
K13459 (disease resistance protein RPS2)
Pathway:
ko04626 (Plant-pathogen interaction) map04626 (Plant-pathogen interaction)
Best hit
Source Best Hit ID Description E-value
TAIR AT1G12210.2 - 0
RefSeq XP_031254314.1 probable disease resistance protein At4g14610 [Pistacia vera] 0
Swiss-Prot O23317 Probable disease resistance protein At4g14610 OS=Arabidopsis thaliana OX=3702 GN=At4g14610 PE=3 SV=1 0
TrEMBL V4T4F2 AAA domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10003918mg PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Anacardiaceae Pistacia vera 40 pistato.v30030420, pistato.v30098710, pistato.v30098730 ...
pistato.v30098800, pistato.v30098810, pistato.v30098820, pistato.v30099140, pistato.v30099220, pistato.v30099470, pistato.v30099500, pistato.v30099530, pistato.v30099550, pistato.v30099660, pistato.v30099670, pistato.v30099690, pistato.v30099720, pistato.v30099740, pistato.v30099760, pistato.v30099770, pistato.v30099940, pistato.v30099960, pistato.v30099980, pistato.v30100070, pistato.v30100130, pistato.v30100440, pistato.v30100450, pistato.v30100540, pistato.v30121940, pistato.v30121980, pistato.v30122010, pistato.v30122020, pistato.v30122180, pistato.v30122230, pistato.v30122300, pistato.v30122310, pistato.v30122340, pistato.v30239310, pistato.v30239320, pistato.v30239330, pistato.v30246520
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.