Basic Information
Locus ID:
pistato.v30121980
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
disease resistance
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr15 | 8521392 | 8527244 | - | pistato.v30121980 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.48 | 81,245.36 Da | 36.80 | 96.34 | -0.35 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00931 | NB-ARC domain | 182 | 291 | 4.7E-20 | IPR002182 |
| SUPERFAMILY | SSF52058 | L domain-like | 487 | 678 | 4.54E-24 | - |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 141 | 293 | 1.38E-26 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 187 | 276 | 1.6E-11 | IPR027417 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 522 | 699 | 4.3E-29 | IPR032675 |
| Gene3D | G3DSA:3.40.50.300 | - | 128 | 186 | 7.6E-9 | IPR027417 |
| PRINTS | PR00364 | Disease resistance protein signature | 164 | 179 | 9.1E-10 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 602 | 618 | 9.1E-10 | - |
| Coils | Coil | Coil | 33 | 81 | - | - |
| Coils | Coil | Coil | 414 | 434 | - | - |
| Coils | Coil | Coil | 204 | 224 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G61190.2 | - | 0 |
| RefSeq | XP_031255451.1 | probable disease resistance protein At4g27220 [Pistacia vera] | 0 |
| O22727 | Probable disease resistance protein At1g61190 OS=Arabidopsis thaliana OX=3702 GN=At1g61190 PE=3 SV=1 | 0 | |
| TrEMBL | V4V1T0 | AAA domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10000123mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Anacardiaceae | Pistacia vera | 40 | pistato.v30030420, pistato.v30098710, pistato.v30098730 ... |