Basic Information
Locus ID:
pistato.v30121940
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
disease resistance
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr15 | 8483242 | 8495055 | - | pistato.v30121940 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.37 | 64,380.38 Da | 41.48 | 89.25 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00931 | NB-ARC domain | 174 | 384 | 3.3E-45 | IPR002182 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 168 | 418 | 9.87E-44 | IPR027417 |
| Gene3D | G3DSA:1.10.8.430 | - | 319 | 410 | 1.5E-14 | IPR042197 |
| Gene3D | G3DSA:3.40.50.300 | - | 144 | 315 | 4.4E-29 | IPR027417 |
| PRINTS | PR00364 | Disease resistance protein signature | 187 | 202 | 2.0E-14 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 353 | 367 | 2.0E-14 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 261 | 275 | 2.0E-14 | - |
| Coils | Coil | Coil | 245 | 265 | - | - |
| Coils | Coil | Coil | 33 | 99 | - | - |
| Coils | Coil | Coil | 443 | 463 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G61190.4 | - | 0 |
| RefSeq | XP_031271461.1 | probable disease resistance protein At4g27220 [Pistacia vera] | 0 |
| O22727 | Probable disease resistance protein At1g61190 OS=Arabidopsis thaliana OX=3702 GN=At1g61190 PE=3 SV=1 | 0 | |
| TrEMBL | V4T8H5 | AAA domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10018706mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Anacardiaceae | Pistacia vera | 40 | pistato.v30030420, pistato.v30098710, pistato.v30098730 ... |