Basic Information
Locus ID:
pistato.v30120560
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
strubbelig-receptor family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr15 | 6180626 | 6187578 | - | pistato.v30120560 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.14 | 69,748.82 Da | 46.67 | 87.07 | -0.35 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 32 | 70 | 1.4E-8 | IPR013210 |
| Pfam | PF00560 | Leucine Rich Repeat | 119 | 138 | 0.5 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 421 | 532 | 4.7E-16 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 143 | 202 | 3.0E-10 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 36 | 234 | 1.32E-39 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 400 | 533 | 9.98E-27 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 33 | 140 | 4.2E-24 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 141 | 255 | 1.1E-21 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 534 | 624 | 8.8E-9 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 399 | 533 | 5.8E-26 | - |
| SMART | SM00369 | LRR_typ_2 | 165 | 188 | 13.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 95 | 119 | 19.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 189 | 211 | 71.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 419 | 635 | 14.195497 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 425 | 448 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 98 | 111 | 2.1E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 165 | 178 | 2.1E-5 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 612 | 635 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 279 | 293 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 256 | 270 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 256 | 293 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G53730.1 | STRUBBELIG-receptor family 6. | 0 |
| RefSeq | XP_031252530.1 | protein STRUBBELIG-RECEPTOR FAMILY 7-like [Pistacia vera] | 0 |
| Q9C8M9 | Protein STRUBBELIG-RECEPTOR FAMILY 6 OS=Arabidopsis thaliana OX=3702 GN=SRF6 PE=1 SV=1 | 0 | |
| TrEMBL | V4RYF7 | Protein kinase domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10025011mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology