Basic Information
Locus ID:
pistato.v30118110
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
DNA RNA polymerases superfamily protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr15 | 2605052 | 2608309 | + | pistato.v30118110 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.34 | 28,410.77 Da | 50.39 | 67.96 | -0.72 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| ProSiteProfiles | PS51257 | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 20 | 5.0 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 78 | 103 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 78 | 125 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 108 | 124 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_031280836.1 | uncharacterized protein LOC116139300 [Pistacia vera] | 0 |
| TrEMBL | A0A2H5PY29 | Retrotrans_gag domain-containing protein OS=Citrus unshiu OX=55188 GN=CUMW_178110 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Salicornia bigelovii | 1 | Sbi_jg36236 |
| Anacardiaceae | Pistacia vera | 11 | pistato.v30071390, pistato.v30079570, pistato.v30079870 ... |