Basic Information
Locus ID:
pistato.v30116380
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
phosphatase 2A 55 kDa regulatory subunit B
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr15 | 489132 | 497752 | - | pistato.v30116380 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.71 | 57,218.47 Da | 49.34 | 75.10 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 224 | 260 | 0.14 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 37 | 504 | 2.75E-35 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 215 | 319 | 1.7E-8 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 34 | 192 | 5.2E-7 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 320 | 508 | 2.6E-7 | IPR015943 |
| SMART | SM00320 | WD40_4 | 103 | 143 | 9.9 | IPR001680 |
| SMART | SM00320 | WD40_4 | 221 | 260 | 0.64 | IPR001680 |
| SMART | SM00320 | WD40_4 | 372 | 426 | 450.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 29 | 64 | 4.2 | IPR001680 |
| SMART | SM00320 | WD40_4 | 271 | 311 | 11.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 330 | 368 | 250.0 | IPR001680 |
| PIRSF | PIRSF037309 | PPA2_B55 | 7 | 512 | 1.3E-200 | IPR000009 |
| ProSitePatterns | PS01024 | Protein phosphatase 2A regulatory subunit PR55 signature 1. | 103 | 117 | - | IPR018067 |
| ProSitePatterns | PS01025 | Protein phosphatase 2A regulatory subunit PR55 signature 2. | 230 | 244 | - | IPR018067 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 260 | 287 | 5.8E-160 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 317 | 344 | 5.8E-160 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 345 | 372 | 5.8E-160 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 481 | 510 | 5.8E-160 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 288 | 316 | 5.8E-160 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 399 | 425 | 5.8E-160 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 43 | 63 | 5.8E-160 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 373 | 398 | 5.8E-160 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 232 | 259 | 5.8E-160 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 119 | 147 | 5.8E-160 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 90 | 118 | 5.8E-160 | IPR000009 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 440 | 459 | - | - |
Gene Ontology
Molecular Function:
Cellular Component:
KEGG Pathway
Pathway:
ko03015 (mRNA surveillance pathway)
map03015 (mRNA surveillance pathway)
ko04071 (Sphingolipid signaling pathway)
map04071 (Sphingolipid signaling pathway)
ko04111 (Cell cycle - yeast)
map04111 (Cell cycle - yeast)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
ko04152 (AMPK signaling pathway)
map04152 (AMPK signaling pathway)
ko04390 (Hippo signaling pathway)
map04390 (Hippo signaling pathway)
ko04391 (Hippo signaling pathway - fly)
map04391 (Hippo signaling pathway - fly)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G17720.2 | Protein phosphatase 2A, regulatory subunit PR55. type 2A protein serine/threonine phosphatase 55 kDa B | 0 |
| RefSeq | XP_031257846.1 | serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform isoform X2 [Pistacia vera] | 0 |
| Q39247 | Serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform OS=Arabidopsis thaliana OX=3702 GN=PP2AB2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1R3HKL2 | Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B OS=Corchorus capsularis OX=210143 GN=CCACVL1_18625 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology