Basic Information
Locus ID:
pistato.v30115670
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Ubiquitin fusion degradation protein 1 homolog
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr14 | 55324354 | 55328502 | - | pistato.v30115670 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.49 | 35,594.95 Da | 53.74 | 65.88 | -0.61 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03152 | Ubiquitin fusion degradation protein UFD1 | 13 | 184 | 1.0E-80 | IPR004854 |
| Gene3D | G3DSA:2.40.40.50 | - | 6 | 107 | 4.2E-45 | IPR042299 |
| Gene3D | G3DSA:3.10.330.10 | - | 109 | 182 | 8.0E-34 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 286 | 310 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 245 | 285 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 194 | 320 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G21270.1 | ubiquitin fusion degradation 1. | 0 |
| RefSeq | XP_031285116.1 | ubiquitin recognition factor in ER-associated degradation protein 1 [Pistacia vera] | 0 |
| P70362 | Ubiquitin recognition factor in ER-associated degradation protein 1 OS=Mus musculus OX=10090 GN=Ufd1 PE=1 SV=2 | 0 | |
| TrEMBL | V4SD54 | Ubiquitin fusion degradation protein 1 homolog OS=Citrus clementina OX=85681 GN=CICLE_v10028844mg PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology