Basic Information
Locus ID:
pistato.v30115530
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
SH3 domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr14 | 55223490 | 55227231 | + | pistato.v30115530 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.50 | 41,282.21 Da | 36.22 | 76.61 | -0.55 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14604 | Variant SH3 domain | 310 | 358 | 6.9E-10 | IPR001452 |
| SUPERFAMILY | SSF103657 | BAR/IMD domain-like | 47 | 259 | 3.14E-22 | IPR027267 |
| SUPERFAMILY | SSF50044 | SH3-domain | 264 | 361 | 4.07E-16 | IPR036028 |
| Gene3D | G3DSA:1.20.1270.60 | Arfaptin homology (AH) domain/BAR domain | 45 | 269 | 1.0E-9 | IPR027267 |
| Gene3D | G3DSA:2.30.30.40 | SH3 Domains | 295 | 370 | 3.1E-15 | - |
| SMART | SM00326 | SH3_2 | 306 | 361 | 1.6E-12 | IPR001452 |
| ProSiteProfiles | PS50002 | Src homology 3 (SH3) domain profile. | 303 | 362 | 19.353832 | IPR001452 |
| Coils | Coil | Coil | 186 | 213 | - | - |
| Coils | Coil | Coil | 1 | 21 | - | - |
| Coils | Coil | Coil | 149 | 176 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G34660.1 | SH3 domain-containing protein. | 0 |
| RefSeq | XP_031271623.1 | SH3 domain-containing protein 2 [Pistacia vera] | 0 |
| Q8VWF1 | SH3 domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=SH3P2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2H5PKJ4 | SH3 domain-containing protein OS=Citrus unshiu OX=55188 GN=CUMW_145400 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology