Basic Information
Locus ID:
pistato.v30110700
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Leucine-rich repeat receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr14 | 46945015 | 46951989 | + | pistato.v30110700 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.96 | 80,586.73 Da | 38.59 | 86.42 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 542 | 626 | 2.3E-15 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 511 | 631 | 4.49E-26 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 53 | 321 | 2.86E-26 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 511 | 613 | 8.4E-36 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 49 | 170 | 5.2E-23 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 171 | 336 | 2.3E-17 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 538 | 717 | 12.65489 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G49760.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_031251474.1 | probable leucine-rich repeat receptor-like protein kinase At5g49770 [Pistacia vera] | 0 |
| Q8GZ99 | Leucine-rich repeat receptor protein kinase HPCA1 OS=Arabidopsis thaliana OX=3702 GN=HPCA1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A836DIU5 | Leucine-rich repeat receptor protein OS=Salix suchowensis OX=1278906 GN=IMY05_016G0193800 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Anacardiaceae | Pistacia vera | 2 | pistato.v30110700, pistato.v30200850 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-5728 |