Basic Information
Locus ID:
pistato.v30109810
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Hippocampus abundant transcript-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr14 | 43391592 | 43396541 | + | pistato.v30109810 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.02 | 50,844.01 Da | 32.92 | 102.85 | 0.55 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF103473 | MFS general substrate transporter | 9 | 433 | 1.96E-20 | IPR036259 |
| Gene3D | G3DSA:1.20.1250.20 | MFS general substrate transporter like domains | 5 | 430 | 1.2E-17 | IPR036259 |
| PRINTS | PR01035 | Tetracycline resistance protein signature | 374 | 397 | 7.4E-5 | IPR001958 |
| PRINTS | PR01035 | Tetracycline resistance protein signature | 56 | 72 | 7.4E-5 | IPR001958 |
| PRINTS | PR01035 | Tetracycline resistance protein signature | 339 | 359 | 7.4E-5 | IPR001958 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G42210.1 | Major facilitator superfamily protein. | 0 |
| RefSeq | XP_031268621.1 | uncharacterized protein LOC116127089 [Pistacia vera] | 0 |
| TrEMBL | A0A067FLC9 | MFS domain-containing protein OS=Citrus sinensis OX=2711 GN=CISIN_1g011514mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology