Basic Information
Locus ID:
pistato.v30107770
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr14 | 34860898 | 34871041 | + | pistato.v30107770 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.65 | 103,544.33 Da | 34.24 | 93.79 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 611 | 862 | 3.08404E-87 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 615 | 803 | 3.7E-40 | IPR001245 |
| Pfam | PF11721 | Malectin domain | 389 | 573 | 1.6E-38 | IPR021720 |
| SUPERFAMILY | SSF52058 | L domain-like | 105 | 377 | 4.85E-57 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 613 | 887 | 3.14E-67 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 67 | 210 | 9.9E-30 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 595 | 669 | 7.3E-21 | - |
| Gene3D | G3DSA:2.60.120.430 | - | 389 | 578 | 4.4E-33 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 211 | 287 | 6.4E-20 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 670 | 869 | 1.5E-55 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 288 | 388 | 9.8E-20 | IPR032675 |
| SMART | SM00220 | serkin_6 | 591 | 851 | 1.9E-15 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 555 | 868 | 28.880722 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 714 | 726 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 897 | 921 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 897 | 917 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G56130.3 | - | 0 |
| RefSeq | XP_031264901.1 | LOW QUALITY PROTEIN: probable LRR receptor-like serine/threonine-protein kinase At1g56130 [Pistacia vera] | 0 |
| C0LGH2 | Probable LRR receptor-like serine/threonine-protein kinase At1g56130 OS=Arabidopsis thaliana OX=3702 GN=At1g56130 PE=2 SV=2 | 0 | |
| TrEMBL | V4UI85 | Protein kinase domain-containing protein (Fragment) OS=Citrus clementina OX=85681 GN=CICLE_v10018029mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology