Basic Information
Locus ID:
pistato.v30107630
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr14 | 34664948 | 34666417 | + | pistato.v30107630 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.96 | 15,549.75 Da | 38.59 | 98.25 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 30 | 133 | 3.2E-24 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 27 | 133 | 2.7E-40 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 17 | 134 | 1.2E-41 | - |
| SMART | SM00219 | tyrkin_6 | 13 | 137 | 0.0029 | IPR020635 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 137 | 22.958576 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 61 | 73 | - | IPR008271 |
| Coils | Coil | Coil | 134 | 137 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G56120.3 | - | 0 |
| RefSeq | XP_031270054.1 | probable LRR receptor-like serine/threonine-protein kinase At1g56130 [Pistacia vera] | 0 |
| C0LGH3 | Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana OX=3702 GN=At1g56140 PE=2 SV=2 | 0 | |
| TrEMBL | A0A7J9AJQ5 | Protein kinase domain-containing protein (Fragment) OS=Gossypium laxum OX=34288 GN=Golax_021026 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00005213 |
| Amaranthaceae | Chenopodium quinoa | 1 | CQ.Regalona.r1.4AG0017500 |
| Anacardiaceae | Pistacia vera | 2 | pistato.v30071510, pistato.v30107630 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10029082m.g.v1.0 |
| Casuarinaceae | Casuarina equisetifolia | 2 | Ceq01G0879, Ceq04G0498 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno17g01540 |
| Poaceae | Thinopyrum elongatum | 1 | Tel3E01G159500 |