Basic Information
Locus ID:
pistato.v30107510
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr14 | 34536232 | 34550661 | + | pistato.v30107510 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.89 | 117,743.09 Da | 30.43 | 94.26 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00560 | Leucine Rich Repeat | 264 | 283 | 0.83 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 563 | 612 | 7.2E-7 | IPR001245 |
| Pfam | PF11721 | Malectin domain | 323 | 508 | 9.2E-42 | IPR021720 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 862 | 1030 | 1.6E-32 | IPR001245 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 616 | 718 | 1.1E-6 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 59 | 316 | 6.29E-53 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 849 | 1060 | 2.28E-52 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 564 | 750 | 1.5E-28 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 905 | 1070 | 2.3E-44 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 12 | 228 | 4.1E-42 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 604 | 732 | 9.3E-24 | - |
| Gene3D | G3DSA:2.60.120.430 | - | 325 | 513 | 1.6E-35 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 229 | 324 | 1.7E-19 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 840 | 904 | 7.7E-12 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 551 | 603 | 1.3E-13 | - |
| SMART | SM00220 | serkin_6 | 838 | 1069 | 1.1E-9 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 821 | 1070 | 25.601633 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G56130.3 | - | 0 |
| RefSeq | XP_031270143.1 | probable LRR receptor-like serine/threonine-protein kinase At1g56140 isoform X4 [Pistacia vera] | 0 |
| C0LGH3 | Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana OX=3702 GN=At1g56140 PE=2 SV=2 | 0 | |
| TrEMBL | A0A2H5N0M1 | Non-specific serine/threonine protein kinase (Fragment) OS=Citrus unshiu OX=55188 GN=CUMW_007960 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology