Basic Information
Locus ID:
pistato.v30106450
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Belongs to the NPH3 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr14 | 28883242 | 28888743 | - | pistato.v30106450 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.10 | 68,838.41 Da | 37.60 | 93.90 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00651 | BTB/POZ domain | 25 | 117 | 3.4E-5 | IPR000210 |
| Pfam | PF03000 | NPH3 family | 210 | 464 | 1.2E-87 | IPR027356 |
| SUPERFAMILY | SSF54695 | POZ domain | 24 | 116 | 6.2E-15 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 15 | 121 | 3.2E-10 | IPR011333 |
| ProSiteProfiles | PS51649 | NPH3 domain profile. | 210 | 488 | 86.131943 | IPR027356 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 29 | 97 | 8.730849 | IPR000210 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 589 | 625 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 590 | 611 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G14820.1 | Phototropic-responsive NPH3 family protein. A member of the NPY gene family (NPY1/AT4G31820, NPY2/AT2G14820, NPY3/AT5G67440, NPY4/AT2G23050, NPY5/AT4G37590). Involved in auxin-mediated organogenesis. | 0 |
| RefSeq | XP_031257460.1 | BTB/POZ domain-containing protein NPY2-like [Pistacia vera] | 0 |
| O80970 | Phototropic-responsive NPH3 family protein NPY2 OS=Arabidopsis thaliana OX=3702 GN=NPY2 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5C7I6G2 | NPH3 domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_011136 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology