Basic Information
Locus ID:
pistato.v30106180
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Endochitinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr14 | 27554722 | 27556080 | - | pistato.v30106180 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.04 | 32,819.82 Da | 45.46 | 62.48 | -0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00325 | chitinase_GH19 | 64 | 288 | 2.86389E-107 | - |
| CDD | cd06921 | ChtBD1_GH19_hevein | 13 | 43 | 3.01276E-13 | - |
| Pfam | PF00182 | Chitinase class I | 63 | 288 | 3.2E-113 | IPR000726 |
| Pfam | PF00187 | Chitin recognition protein | 14 | 51 | 4.2E-13 | IPR001002 |
| SUPERFAMILY | SSF57016 | Plant lectins/antimicrobial peptides | 14 | 53 | 8.12E-11 | IPR036861 |
| SUPERFAMILY | SSF53955 | Lysozyme-like | 60 | 294 | 1.88E-96 | IPR023346 |
| Gene3D | G3DSA:3.30.20.10 | Endochitinase, domain 2 | 144 | 197 | 1.9E-109 | - |
| Gene3D | G3DSA:3.30.60.10 | - | 12 | 54 | 1.9E-15 | IPR036861 |
| Gene3D | G3DSA:1.10.530.10 | - | 68 | 294 | 1.9E-109 | - |
| SMART | SM00270 | ChitinBD_3 | 14 | 51 | 3.0E-14 | IPR001002 |
| PIRSF | PIRSF001060 | Endochitinase | 1 | 295 | 2.1E-112 | IPR016283 |
| ProSiteProfiles | PS50941 | Chitin-binding type-1 domain profile. | 12 | 53 | 10.746605 | IPR001002 |
| ProSitePatterns | PS00774 | Chitinases family 19 signature 2. | 201 | 211 | - | IPR000726 |
| ProSitePatterns | PS00026 | Chitin recognition or binding domain signature. | 24 | 43 | - | IPR018371 |
| ProSitePatterns | PS00773 | Chitinases family 19 signature 1. | 79 | 101 | - | IPR000726 |
| PRINTS | PR00451 | Chitin-binding domain signature | 37 | 44 | 9.8E-5 | IPR001002 |
| PRINTS | PR00451 | Chitin-binding domain signature | 22 | 30 | 9.8E-5 | IPR001002 |
| PRINTS | PR00451 | Chitin-binding domain signature | 30 | 37 | 9.8E-5 | IPR001002 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G12500.1 | basic chitinase. encodes a basic chitinase involved in ethylene/jasmonic acid mediated signalling pathway during systemic acquired resistance based on expression analyses. | 0 |
| RefSeq | XP_044488594.1 | probable inactive chitinase-like protein LaCIC [Mangifera indica] | 0 |
| P06215 | Endochitinase OS=Phaseolus vulgaris OX=3885 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5C7I768 | Chitin-binding type-1 domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_011981 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology