Basic Information
Locus ID:
pistato.v30105180
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Vacuolar protein sorting-associated protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr14 | 20620194 | 20634280 | + | pistato.v30105180 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.15 | 74,364.09 Da | 34.10 | 90.06 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd03044 | GST_N_EF1Bgamma | 610 | 678 | 1.39359E-24 | - |
| Pfam | PF02798 | Glutathione S-transferase, N-terminal domain | 615 | 678 | 6.7E-13 | IPR004045 |
| SUPERFAMILY | SSF52833 | Thioredoxin-like | 608 | 678 | 1.05E-12 | IPR036249 |
| Gene3D | G3DSA:3.40.30.10 | Glutaredoxin | 605 | 678 | 4.0E-19 | - |
| ProSiteProfiles | PS50404 | Soluble glutathione S-transferase N-terminal domain profile. | 606 | 679 | 17.181297 | IPR004045 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 463 | 478 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 459 | 478 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G48090.5 | - | 0 |
| RefSeq | XP_031259604.1 | vacuolar protein sorting-associated protein 13-like [Pistacia vera] | 0 |
| Q6YW46 | Elongation factor 1-gamma 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0220500 PE=2 SV=2 | 0 | |
| TrEMBL | A0A5C7IR45 | C2 domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_000118 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology