Basic Information
Locus ID:
pistato.v30105040
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Leucine-rich repeat receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr14 | 20012032 | 20018299 | + | pistato.v30105040 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.33 | 65,744.42 Da | 32.10 | 85.55 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF52058 | L domain-like | 49 | 302 | 3.4E-40 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 2 | 170 | 1.5E-32 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 240 | 314 | 2.8E-6 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 171 | 239 | 1.3E-12 | IPR032675 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 555 | 570 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 555 | 598 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G49760.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_031254464.1 | LOW QUALITY PROTEIN: probable leucine-rich repeat receptor-like protein kinase At5g49770 [Pistacia vera] | 0 |
| Q8GZ99 | Leucine-rich repeat receptor protein kinase HPCA1 OS=Arabidopsis thaliana OX=3702 GN=HPCA1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5C7H9U8 | Protein kinase domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_018795 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg21360, Sbi_jg42451 |
| Amaranthaceae | Suaeda glauca | 1 | Sgl37105 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000002799, gene:ENSEOMG00000028241 ... |
| Anacardiaceae | Pistacia vera | 6 | pistato.v30101380, pistato.v30105040, pistato.v30212780 ... |
| Apiaceae | Apium graveolens | 1 | Ag7G01691 |
| Arecaceae | Cocos nucifera | 1 | contig68834334G000010 |
| Poaceae | Oryza coarctata | 1 | Oco09G012560 |
| Poaceae | Zoysia japonica | 4 | nbis-gene-25417, nbis-gene-25420, nbis-gene-31422 ... |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_2_RagTag.1549 |
| Salicaceae | Populus euphratica | 2 | populus_peu08185, populus_peu33573 |
| Solanaceae | Solanum chilense | 1 | SOLCI004149600 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC114077592 |
| Zosteraceae | Zostera marina | 1 | Zosma06g14300.v3.1 |