HalophFGD

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Basic Information
Locus ID: pistato.v30100980
Species & Taxonomic ID: Pistacia vera & 55513
Genome Assembly: GWHBKLD00000000
Description: Wall-associated receptor kinase galacturonan-binding
Maps and Mapping Data
Chromosome Start End Strand ID
chr13 40086671 40087866 + pistato.v30100980
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.32 38,232.89 Da 52.61 77.71 -0.20
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF13947 Wall-associated receptor kinase galacturonan-binding 26 85 6.9E-11 IPR025287
Gene Ontology
Molecular Function:
GO:0030247 (polysaccharide binding)
Best hit
Source Best Hit ID Description E-value
TAIR AT1G21250.1 cell wall-associated kinase. cell wall-associated kinase, may function as a signaling receptor of extracellular matrix component such as oligogalacturonides. 0
RefSeq XP_031287154.1 wall-associated receptor kinase-like 10 [Pistacia vera] 0
Swiss-Prot Q39191 Wall-associated receptor kinase 1 OS=Arabidopsis thaliana OX=3702 GN=WAK1 PE=1 SV=2 0
TrEMBL A0A067FH24 Protein kinase domain-containing protein (Fragment) OS=Citrus sinensis OX=2711 GN=CISIN_1g035536mg PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Anacardiaceae Pistacia vera 12 pistato.v30091090, pistato.v30098920, pistato.v30098930 ...
pistato.v30099070, pistato.v30099100, pistato.v30100120, pistato.v30100890, pistato.v30100900, pistato.v30100970, pistato.v30100980, pistato.v30122210, pistato.v30223880
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.