Basic Information
Locus ID:
pistato.v30100630
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
ATPase family associated with various cellular activities (AAA)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr13 | 39493746 | 39497337 | + | pistato.v30100630 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.71 | 52,955.31 Da | 40.12 | 84.20 | -0.35 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00009 | AAA | 206 | 339 | 3.58277E-23 | - |
| Pfam | PF00004 | ATPase family associated with various cellular activities (AAA) | 208 | 338 | 4.8E-38 | IPR003959 |
| Pfam | PF17862 | AAA+ lid domain | 360 | 394 | 2.3E-10 | IPR041569 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 167 | 387 | 2.92E-57 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 168 | 464 | 1.3E-90 | IPR027417 |
| Gene3D | G3DSA:1.10.8.60 | - | 340 | 447 | 1.3E-90 | - |
| SMART | SM00382 | AAA_5 | 204 | 341 | 2.6E-19 | IPR003593 |
| ProSitePatterns | PS00674 | AAA-protein family signature. | 311 | 330 | - | IPR003960 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 402 | 425 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 90 | 106 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 408 | 425 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 90 | 132 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G28000.1 | P-loop containing nucleoside triphosphate hydrolases superfamily protein. | 0 |
| RefSeq | XP_031261458.1 | uncharacterized AAA domain-containing protein C24B10.10c-like isoform X2 [Pistacia vera] | 0 |
| Q6NW58 | Spastin OS=Danio rerio OX=7955 GN=spast PE=2 SV=2 | 0 | |
| TrEMBL | A0A314XQB2 | Putative cell division cycle ATPase OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_01796 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology