HalophFGD

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Basic Information
Locus ID: pistato.v30100440
Species & Taxonomic ID: Pistacia vera & 55513
Genome Assembly: GWHBKLD00000000
Description: disease resistance
Maps and Mapping Data
Chromosome Start End Strand ID
chr13 39114584 39115699 + pistato.v30100440
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
9.36 26,558.99 Da 35.16 80.79 -0.88
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Coils Coil Coil 33 60 - -
Coils Coil Coil 127 175 - -
KEGG Pathway
KO Term:
K13459 (disease resistance protein RPS2)
Pathway:
ko04626 (Plant-pathogen interaction) map04626 (Plant-pathogen interaction)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_031280989.1 probable disease resistance protein At4g27220 [Pistacia vera] 0
TrEMBL A0A2H5QSN4 NB-ARC domain-containing protein OS=Citrus unshiu OX=55188 GN=CUMW_258190 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Anacardiaceae Pistacia vera 40 pistato.v30030420, pistato.v30098710, pistato.v30098730 ...
pistato.v30098800, pistato.v30098810, pistato.v30098820, pistato.v30099140, pistato.v30099220, pistato.v30099470, pistato.v30099500, pistato.v30099530, pistato.v30099550, pistato.v30099660, pistato.v30099670, pistato.v30099690, pistato.v30099720, pistato.v30099740, pistato.v30099760, pistato.v30099770, pistato.v30099940, pistato.v30099960, pistato.v30099980, pistato.v30100070, pistato.v30100130, pistato.v30100440, pistato.v30100450, pistato.v30100540, pistato.v30121940, pistato.v30121980, pistato.v30122010, pistato.v30122020, pistato.v30122180, pistato.v30122230, pistato.v30122300, pistato.v30122310, pistato.v30122340, pistato.v30239310, pistato.v30239320, pistato.v30239330, pistato.v30246520
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.