Basic Information
Locus ID:
pistato.v30100130
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
disease resistance
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr13 | 38169469 | 38176634 | - | pistato.v30100130 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.51 | 126,957.80 Da | 44.12 | 97.02 | -0.29 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00931 | NB-ARC domain | 175 | 383 | 3.0E-44 | IPR002182 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 168 | 417 | 2.44E-42 | IPR027417 |
| SUPERFAMILY | SSF52058 | L domain-like | 509 | 1056 | 1.65E-29 | - |
| Gene3D | G3DSA:1.10.8.430 | - | 318 | 408 | 4.9E-16 | IPR042197 |
| Gene3D | G3DSA:3.40.50.300 | - | 144 | 314 | 6.0E-27 | IPR027417 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 492 | 713 | 3.8E-25 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 723 | 921 | 3.8E-9 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 922 | 1078 | 4.5E-8 | IPR032675 |
| PRINTS | PR00364 | Disease resistance protein signature | 187 | 202 | 1.8E-19 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 260 | 274 | 1.8E-19 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 630 | 646 | 1.8E-19 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 352 | 366 | 1.8E-19 | - |
| Coils | Coil | Coil | 442 | 462 | - | - |
| Coils | Coil | Coil | 33 | 99 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G27190.1 | NB-ARC domain-containing disease resistance protein. | 0 |
| RefSeq | XP_031255412.1 | uncharacterized protein LOC116113399 [Pistacia vera] | 0 |
| Q9T048 | Disease resistance protein At4g27190 OS=Arabidopsis thaliana OX=3702 GN=At4g27190 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2H5QRW5 | AAA domain-containing protein OS=Citrus unshiu OX=55188 GN=CUMW_255870 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Anacardiaceae | Pistacia vera | 40 | pistato.v30030420, pistato.v30098710, pistato.v30098730 ... |