Basic Information
Locus ID:
pistato.v30100070
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
disease resistance
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr13 | 38093805 | 38106747 | - | pistato.v30100070 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.56 | 145,524.02 Da | 45.58 | 94.61 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00931 | NB-ARC domain | 177 | 427 | 1.1E-38 | IPR002182 |
| Pfam | PF13855 | Leucine rich repeat | 634 | 693 | 8.0E-7 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 821 | 1186 | 1.41E-19 | - |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 170 | 440 | 9.99E-40 | IPR027417 |
| SUPERFAMILY | SSF52058 | L domain-like | 532 | 928 | 5.95E-30 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 755 | 936 | 6.8E-9 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 513 | 748 | 7.8E-30 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1115 | 1249 | 1.2E-6 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 937 | 1100 | 5.3E-12 | IPR032675 |
| Gene3D | G3DSA:1.10.8.430 | - | 341 | 429 | 1.0E-15 | IPR042197 |
| Gene3D | G3DSA:3.40.50.300 | - | 160 | 338 | 2.2E-27 | IPR027417 |
| PRINTS | PR00364 | Disease resistance protein signature | 188 | 203 | 2.2E-14 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 375 | 389 | 2.2E-14 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 653 | 669 | 2.2E-14 | - |
| Coils | Coil | Coil | 34 | 96 | - | - |
| Coils | Coil | Coil | 465 | 485 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G27190.1 | NB-ARC domain-containing disease resistance protein. | 0 |
| RefSeq | XP_031255412.1 | uncharacterized protein LOC116113399 [Pistacia vera] | 0 |
| Q9T048 | Disease resistance protein At4g27190 OS=Arabidopsis thaliana OX=3702 GN=At4g27190 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2H5QRW5 | AAA domain-containing protein OS=Citrus unshiu OX=55188 GN=CUMW_255870 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Anacardiaceae | Pistacia vera | 40 | pistato.v30030420, pistato.v30098710, pistato.v30098730 ... |