Basic Information
Locus ID:
pistato.v30099980
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Belongs to the disease resistance NB-LRR family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr13 | 37896200 | 37904661 | + | pistato.v30099980 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.56 | 123,990.82 Da | 46.49 | 95.16 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00931 | NB-ARC domain | 163 | 370 | 2.0E-37 | IPR002182 |
| Pfam | PF13855 | Leucine rich repeat | 596 | 653 | 3.7E-7 | IPR001611 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 154 | 403 | 2.7E-42 | IPR027417 |
| SUPERFAMILY | SSF52058 | L domain-like | 793 | 1043 | 1.63E-9 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 509 | 896 | 7.82E-30 | - |
| Gene3D | G3DSA:3.40.50.300 | - | 142 | 300 | 3.5E-27 | IPR027417 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 498 | 898 | 5.3E-36 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 899 | 1058 | 6.8E-8 | IPR032675 |
| Gene3D | G3DSA:1.10.8.430 | - | 304 | 394 | 2.3E-16 | IPR042197 |
| PRINTS | PR00364 | Disease resistance protein signature | 615 | 631 | 2.1E-19 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 175 | 190 | 2.1E-19 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 338 | 352 | 2.1E-19 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 246 | 260 | 2.1E-19 | - |
| Coils | Coil | Coil | 428 | 448 | - | - |
| Coils | Coil | Coil | 26 | 92 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G27190.1 | NB-ARC domain-containing disease resistance protein. | 0 |
| RefSeq | XP_031254302.1 | uncharacterized protein LOC116112287 [Pistacia vera] | 0 |
| Q9T048 | Disease resistance protein At4g27190 OS=Arabidopsis thaliana OX=3702 GN=At4g27190 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2H5QRW5 | AAA domain-containing protein OS=Citrus unshiu OX=55188 GN=CUMW_255870 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Anacardiaceae | Pistacia vera | 40 | pistato.v30030420, pistato.v30098710, pistato.v30098730 ... |