Basic Information
Locus ID:
pistato.v30099940
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
disease resistance
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr13 | 37842121 | 37847652 | + | pistato.v30099940 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.59 | 144,811.63 Da | 47.60 | 97.38 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 925 | 982 | 2.1E-6 | IPR001611 |
| Pfam | PF00931 | NB-ARC domain | 488 | 699 | 1.4E-41 | IPR002182 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 483 | 732 | 6.26E-43 | IPR027417 |
| SUPERFAMILY | SSF52058 | L domain-like | 825 | 1226 | 3.74E-32 | - |
| Gene3D | G3DSA:3.40.50.300 | - | 464 | 629 | 9.0E-29 | IPR027417 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 832 | 1253 | 2.9E-42 | IPR032675 |
| Gene3D | G3DSA:1.10.8.430 | - | 633 | 723 | 6.1E-16 | IPR042197 |
| PRINTS | PR00364 | Disease resistance protein signature | 944 | 960 | 5.1E-20 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 667 | 681 | 5.1E-20 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 575 | 589 | 5.1E-20 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 505 | 520 | 5.1E-20 | - |
| Coils | Coil | Coil | 757 | 777 | - | - |
| Coils | Coil | Coil | 255 | 317 | - | - |
| Coils | Coil | Coil | 175 | 195 | - | - |
| Coils | Coil | Coil | 363 | 411 | - | - |
| Coils | Coil | Coil | 74 | 105 | - | - |
| Coils | Coil | Coil | 32 | 66 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G27190.1 | NB-ARC domain-containing disease resistance protein. | 0 |
| RefSeq | XP_031280989.1 | probable disease resistance protein At4g27220 [Pistacia vera] | 0 |
| Q9T048 | Disease resistance protein At4g27190 OS=Arabidopsis thaliana OX=3702 GN=At4g27190 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2H5QRW5 | AAA domain-containing protein OS=Citrus unshiu OX=55188 GN=CUMW_255870 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Anacardiaceae | Pistacia vera | 40 | pistato.v30030420, pistato.v30098710, pistato.v30098730 ... |