Basic Information
Locus ID:
pistato.v30099760
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
disease resistance
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr13 | 37625112 | 37629484 | + | pistato.v30099760 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.04 | 78,563.24 Da | 39.23 | 101.03 | -0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 584 | 642 | 1.3E-6 | IPR001611 |
| Pfam | PF00931 | NB-ARC domain | 138 | 378 | 2.3E-39 | IPR002182 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 117 | 395 | 2.71E-38 | IPR027417 |
| SUPERFAMILY | SSF52058 | L domain-like | 492 | 665 | 2.38E-24 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 491 | 680 | 1.4E-31 | IPR032675 |
| Gene3D | G3DSA:1.10.8.430 | - | 295 | 379 | 9.9E-15 | IPR042197 |
| Gene3D | G3DSA:3.40.50.300 | - | 114 | 293 | 6.4E-26 | IPR027417 |
| PRINTS | PR00364 | Disease resistance protein signature | 151 | 166 | 1.4E-18 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 237 | 251 | 1.4E-18 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 604 | 620 | 1.4E-18 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 329 | 343 | 1.4E-18 | - |
| Coils | Coil | Coil | 416 | 450 | - | - |
| Coils | Coil | Coil | 3 | 65 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G27190.1 | NB-ARC domain-containing disease resistance protein. | 0 |
| RefSeq | XP_031286053.1 | probable disease resistance protein At1g61190 [Pistacia vera] | 0 |
| Q9T048 | Disease resistance protein At4g27190 OS=Arabidopsis thaliana OX=3702 GN=At4g27190 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2H5QRW5 | AAA domain-containing protein OS=Citrus unshiu OX=55188 GN=CUMW_255870 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Anacardiaceae | Pistacia vera | 40 | pistato.v30030420, pistato.v30098710, pistato.v30098730 ... |