Basic Information
Locus ID:
pistato.v30099720
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
disease resistance
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr13 | 37538384 | 37546353 | + | pistato.v30099720 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.75 | 146,709.22 Da | 43.39 | 98.99 | -0.29 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 802 | 860 | 3.7E-7 | IPR001611 |
| Pfam | PF00931 | NB-ARC domain | 373 | 605 | 6.1E-42 | IPR002182 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 367 | 621 | 8.61E-42 | IPR027417 |
| SUPERFAMILY | SSF52047 | RNI-like | 1070 | 1253 | 2.35E-7 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 720 | 1058 | 9.42E-27 | - |
| Gene3D | G3DSA:1.10.8.430 | - | 522 | 612 | 7.2E-16 | IPR042197 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1059 | 1243 | 1.8E-10 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 705 | 1058 | 4.1E-29 | IPR032675 |
| Gene3D | G3DSA:3.40.50.300 | - | 353 | 518 | 4.0E-26 | IPR027417 |
| PRINTS | PR00364 | Disease resistance protein signature | 556 | 570 | 2.2E-18 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 464 | 478 | 2.2E-18 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 390 | 405 | 2.2E-18 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 821 | 837 | 2.2E-18 | - |
| Coils | Coil | Coil | 646 | 666 | - | - |
| Coils | Coil | Coil | 262 | 296 | - | - |
| Coils | Coil | Coil | 448 | 468 | - | - |
| Coils | Coil | Coil | 55 | 100 | - | - |
| Coils | Coil | Coil | 157 | 191 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G27190.1 | NB-ARC domain-containing disease resistance protein. | 0 |
| RefSeq | XP_031258418.1 | probable disease resistance protein At4g27220 [Pistacia vera] | 0 |
| Q9T048 | Disease resistance protein At4g27190 OS=Arabidopsis thaliana OX=3702 GN=At4g27190 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2H5QRW5 | AAA domain-containing protein OS=Citrus unshiu OX=55188 GN=CUMW_255870 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Anacardiaceae | Pistacia vera | 40 | pistato.v30030420, pistato.v30098710, pistato.v30098730 ... |