Basic Information
Locus ID:
pistato.v30099690
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
disease resistance
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr13 | 37445714 | 37454443 | + | pistato.v30099690 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.97 | 162,910.45 Da | 44.82 | 97.39 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00931 | NB-ARC domain | 491 | 701 | 5.1E-43 | IPR002182 |
| SUPERFAMILY | SSF52058 | L domain-like | 1191 | 1386 | 1.43E-6 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 796 | 1231 | 6.04E-31 | - |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 477 | 734 | 1.38E-45 | IPR027417 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1234 | 1389 | 1.9E-9 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 819 | 1233 | 8.7E-32 | IPR032675 |
| Gene3D | G3DSA:1.10.8.430 | - | 635 | 719 | 2.3E-16 | IPR042197 |
| Gene3D | G3DSA:3.40.50.300 | - | 469 | 631 | 1.1E-29 | IPR027417 |
| PRINTS | PR00364 | Disease resistance protein signature | 669 | 683 | 3.5E-19 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 946 | 962 | 3.5E-19 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 577 | 591 | 3.5E-19 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 506 | 521 | 3.5E-19 | - |
| Coils | Coil | Coil | 165 | 210 | - | - |
| Coils | Coil | Coil | 270 | 304 | - | - |
| Coils | Coil | Coil | 33 | 99 | - | - |
| Coils | Coil | Coil | 378 | 412 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G27190.1 | NB-ARC domain-containing disease resistance protein. | 0 |
| RefSeq | XP_031280994.1 | probable disease resistance protein At4g27220 [Pistacia vera] | 0 |
| Q9T048 | Disease resistance protein At4g27190 OS=Arabidopsis thaliana OX=3702 GN=At4g27190 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2H5QRW5 | AAA domain-containing protein OS=Citrus unshiu OX=55188 GN=CUMW_255870 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Anacardiaceae | Pistacia vera | 40 | pistato.v30030420, pistato.v30098710, pistato.v30098730 ... |