Basic Information
Locus ID:
pistato.v30099670
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
disease resistance
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr13 | 37406578 | 37423072 | - | pistato.v30099670 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.27 | 129,999.35 Da | 46.94 | 96.61 | -0.31 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 590 | 645 | 1.8E-6 | IPR001611 |
| Pfam | PF00931 | NB-ARC domain | 171 | 385 | 1.0E-41 | IPR002182 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 166 | 417 | 2.37E-40 | IPR027417 |
| SUPERFAMILY | SSF52058 | L domain-like | 883 | 1046 | 3.51E-5 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 479 | 903 | 9.01E-35 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 495 | 725 | 2.8E-31 | IPR032675 |
| Gene3D | G3DSA:3.40.50.300 | - | 152 | 313 | 2.8E-29 | IPR027417 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 920 | 1063 | 8.5E-9 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 727 | 919 | 4.8E-12 | IPR032675 |
| Gene3D | G3DSA:1.10.8.430 | - | 317 | 401 | 2.2E-14 | IPR042197 |
| PRINTS | PR00364 | Disease resistance protein signature | 188 | 203 | 1.2E-19 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 351 | 365 | 1.2E-19 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 631 | 647 | 1.2E-19 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 259 | 273 | 1.2E-19 | - |
| Coils | Coil | Coil | 441 | 461 | - | - |
| Coils | Coil | Coil | 34 | 100 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G27190.1 | NB-ARC domain-containing disease resistance protein. | 0 |
| RefSeq | XP_031255471.1 | uncharacterized protein LOC116113456 isoform X1 [Pistacia vera] | 0 |
| Q9T048 | Disease resistance protein At4g27190 OS=Arabidopsis thaliana OX=3702 GN=At4g27190 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2H5QRW5 | AAA domain-containing protein OS=Citrus unshiu OX=55188 GN=CUMW_255870 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Anacardiaceae | Pistacia vera | 40 | pistato.v30030420, pistato.v30098710, pistato.v30098730 ... |