Basic Information
Locus ID:
pistato.v30099550
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
disease resistance
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr13 | 37192144 | 37200438 | - | pistato.v30099550 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.39 | 126,057.70 Da | 42.55 | 102.44 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00931 | NB-ARC domain | 158 | 389 | 2.7E-43 | IPR002182 |
| Pfam | PF13855 | Leucine rich repeat | 620 | 679 | 1.7E-6 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 497 | 911 | 4.42E-34 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 875 | 1057 | 3.03E-5 | - |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 147 | 405 | 2.34E-45 | IPR027417 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 485 | 576 | 7.2E-7 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 577 | 1032 | 2.9E-41 | IPR032675 |
| Gene3D | G3DSA:1.10.8.430 | - | 306 | 396 | 1.3E-16 | IPR042197 |
| Gene3D | G3DSA:3.40.50.300 | - | 141 | 302 | 2.7E-29 | IPR027417 |
| PRINTS | PR00364 | Disease resistance protein signature | 340 | 354 | 1.7E-18 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 639 | 655 | 1.7E-18 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 248 | 262 | 1.7E-18 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 175 | 190 | 1.7E-18 | - |
| Coils | Coil | Coil | 225 | 252 | - | - |
| Coils | Coil | Coil | 26 | 92 | - | - |
| Coils | Coil | Coil | 430 | 450 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G27190.1 | NB-ARC domain-containing disease resistance protein. | 0 |
| RefSeq | XP_031285938.1 | putative disease resistance protein At4g19050 isoform X1 [Pistacia vera] | 0 |
| Q9T048 | Disease resistance protein At4g27190 OS=Arabidopsis thaliana OX=3702 GN=At4g27190 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2H5QRW5 | AAA domain-containing protein OS=Citrus unshiu OX=55188 GN=CUMW_255870 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Anacardiaceae | Pistacia vera | 40 | pistato.v30030420, pistato.v30098710, pistato.v30098730 ... |