Basic Information
Locus ID:
pistato.v30099530
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
disease resistance
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr13 | 37162422 | 37168896 | - | pistato.v30099530 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.74 | 105,594.28 Da | 45.76 | 101.32 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00931 | NB-ARC domain | 153 | 368 | 2.3E-44 | IPR002182 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 146 | 402 | 6.05E-43 | IPR027417 |
| SUPERFAMILY | SSF52058 | L domain-like | 464 | 904 | 1.7E-29 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 479 | 706 | 2.3E-27 | IPR032675 |
| Gene3D | G3DSA:3.40.50.300 | - | 130 | 298 | 3.7E-27 | IPR027417 |
| Gene3D | G3DSA:1.10.8.430 | - | 302 | 386 | 3.6E-15 | IPR042197 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 718 | 916 | 4.3E-9 | IPR032675 |
| PRINTS | PR00364 | Disease resistance protein signature | 618 | 634 | 3.3E-19 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 244 | 258 | 3.3E-19 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 336 | 350 | 3.3E-19 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 170 | 185 | 3.3E-19 | - |
| Coils | Coil | Coil | 35 | 76 | - | - |
| Coils | Coil | Coil | 426 | 450 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G27190.1 | NB-ARC domain-containing disease resistance protein. | 0 |
| RefSeq | XP_031280988.1 | probable disease resistance protein At4g27220 [Pistacia vera] | 0 |
| Q9T048 | Disease resistance protein At4g27190 OS=Arabidopsis thaliana OX=3702 GN=At4g27190 PE=2 SV=1 | 0 | |
| TrEMBL | V4T8H5 | AAA domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10018706mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Anacardiaceae | Pistacia vera | 40 | pistato.v30030420, pistato.v30098710, pistato.v30098730 ... |