Basic Information
Locus ID:
pistato.v30099470
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
disease resistance
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr13 | 37022023 | 37029353 | - | pistato.v30099470 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.39 | 118,387.48 Da | 45.64 | 95.56 | -0.35 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00931 | NB-ARC domain | 283 | 482 | 3.0E-33 | IPR002182 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 275 | 516 | 3.31E-36 | IPR027417 |
| SUPERFAMILY | SSF52058 | L domain-like | 578 | 1009 | 7.82E-25 | - |
| Gene3D | G3DSA:1.10.8.430 | - | 416 | 500 | 2.2E-15 | IPR042197 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 601 | 821 | 2.8E-21 | IPR032675 |
| Gene3D | G3DSA:3.40.50.300 | - | 262 | 412 | 6.7E-18 | IPR027417 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 823 | 1019 | 4.8E-10 | IPR032675 |
| PRINTS | PR00364 | Disease resistance protein signature | 450 | 464 | 5.4E-16 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 299 | 314 | 5.4E-16 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 724 | 740 | 5.4E-16 | - |
| Coils | Coil | Coil | 167 | 205 | - | - |
| Coils | Coil | Coil | 540 | 560 | - | - |
| Coils | Coil | Coil | 33 | 99 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G27190.1 | NB-ARC domain-containing disease resistance protein. | 0 |
| RefSeq | XP_031280989.1 | probable disease resistance protein At4g27220 [Pistacia vera] | 0 |
| Q9T048 | Disease resistance protein At4g27190 OS=Arabidopsis thaliana OX=3702 GN=At4g27190 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2H5QRW5 | AAA domain-containing protein OS=Citrus unshiu OX=55188 GN=CUMW_255870 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Anacardiaceae | Pistacia vera | 40 | pistato.v30030420, pistato.v30098710, pistato.v30098730 ... |