halophFGD

Basic Information

Locus ID: pistato.v30099260

Species & Taxonomic ID: Pistacia vera & 55513

Genome Assembly: GWHBKLD00000000

Description: Topless-related protein

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr13	36121426	36124582	+	pistato.v30099260

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
5.76	36,275.72 Da	55.28	103.35	0.20

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
SUPERFAMILY	SSF50978	WD40 repeat-like	178	326	2.01E-10	IPR036322
Gene3D	G3DSA:2.130.10.10	-	197	334	1.3E-8	IPR015943
SMART	SM00320	WD40_4	188	227	1.4	IPR001680
SMART	SM00320	WD40_4	284	324	17.0	IPR001680

Gene Ontology

Molecular Function:

GO:0005515 (protein binding)

Best hit

Source	Best Hit ID	Description	E-value
TAIR	AT1G80490.2	TOPLESS-related 1.	0
RefSeq	XP_031283020.1	LOW QUALITY PROTEIN: uncharacterized protein LOC116141685 [Pistacia vera]	0
Swiss-Prot	Q0J7U6	Protein TOPLESS-RELATED PROTEIN 2 OS=Oryza sativa subsp. japonica OX=39947 GN=TPR2 PE=1 SV=1	0
TrEMBL	A0A067E9N2	Protein TOPLESS (Fragment) OS=Citrus sinensis OX=2711 GN=CISIN_1g0011591mg PE=4 SV=1	0

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Anacardiaceae	Pistacia vera	5	pistato.v30099240, pistato.v30099260, pistato.v30099620 ... pistato.v30099750, pistato.v30239220