Basic Information
Locus ID:
pistato.v30099220
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
disease resistance
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr13 | 36072431 | 36078985 | + | pistato.v30099220 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.38 | 100,211.36 Da | 40.94 | 92.99 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00931 | NB-ARC domain | 167 | 255 | 9.8E-13 | IPR002182 |
| Pfam | PF00931 | NB-ARC domain | 281 | 465 | 3.5E-21 | IPR002182 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 168 | 460 | 9.61E-21 | IPR027417 |
| SUPERFAMILY | SSF52058 | L domain-like | 559 | 853 | 3.15E-24 | - |
| Gene3D | G3DSA:1.10.8.430 | - | 399 | 487 | 6.6E-13 | IPR042197 |
| Gene3D | G3DSA:3.40.50.300 | - | 150 | 356 | 8.7E-24 | IPR027417 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 590 | 874 | 2.2E-29 | IPR032675 |
| PRINTS | PR00364 | Disease resistance protein signature | 713 | 729 | 1.8E-13 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 431 | 445 | 1.8E-13 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 180 | 195 | 1.8E-13 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 254 | 298 | - | - |
| Coils | Coil | Coil | 26 | 74 | - | - |
| Coils | Coil | Coil | 244 | 264 | - | - |
| Coils | Coil | Coil | 521 | 541 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G61190.2 | - | 0 |
| RefSeq | XP_031280971.1 | probable disease resistance protein At4g27220 isoform X1 [Pistacia vera] | 0 |
| O22727 | Probable disease resistance protein At1g61190 OS=Arabidopsis thaliana OX=3702 GN=At1g61190 PE=3 SV=1 | 0 | |
| TrEMBL | V4T8H5 | AAA domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10018706mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Anacardiaceae | Pistacia vera | 40 | pistato.v30030420, pistato.v30098710, pistato.v30098730 ... |