Basic Information
Locus ID:
pistato.v30098800
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
disease resistance
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr13 | 35382957 | 35385108 | + | pistato.v30098800 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.21 | 33,817.62 Da | 37.59 | 89.53 | -0.55 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00931 | NB-ARC domain | 132 | 296 | 6.1E-27 | IPR002182 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 128 | 296 | 8.92E-24 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 123 | 288 | 3.4E-27 | IPR027417 |
| PRINTS | PR00364 | Disease resistance protein signature | 232 | 246 | 1.6E-8 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 149 | 164 | 1.6E-8 | - |
| Coils | Coil | Coil | 28 | 66 | - | - |
| Coils | Coil | Coil | 213 | 233 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G61310.1 | LRR and NB-ARC domains-containing disease resistance protein. | 0 |
| RefSeq | XP_031265610.1 | uncharacterized protein LOC116124036 [Pistacia vera] | 0 |
| O64789 | Probable disease resistance protein At1g61310 OS=Arabidopsis thaliana OX=3702 GN=At1g61310 PE=2 SV=1 | 0 | |
| TrEMBL | A0A067DE76 | AAA domain-containing protein (Fragment) OS=Citrus sinensis OX=2711 GN=CISIN_1g0447551mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Anacardiaceae | Pistacia vera | 40 | pistato.v30030420, pistato.v30098710, pistato.v30098730 ... |