Basic Information
Locus ID:
pistato.v30098730
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
disease resistance
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr13 | 35251047 | 35262781 | + | pistato.v30098730 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.79 | 88,898.89 Da | 41.80 | 93.54 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00931 | NB-ARC domain | 214 | 334 | 2.1E-19 | IPR002182 |
| Pfam | PF13855 | Leucine rich repeat | 401 | 460 | 2.4E-6 | IPR001611 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 166 | 363 | 2.99E-27 | IPR027417 |
| SUPERFAMILY | SSF52058 | L domain-like | 371 | 740 | 4.25E-27 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 357 | 596 | 2.7E-29 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 597 | 752 | 9.5E-11 | IPR032675 |
| Gene3D | G3DSA:1.10.8.430 | - | 264 | 355 | 4.3E-16 | IPR042197 |
| Gene3D | G3DSA:3.40.50.300 | - | 144 | 227 | 5.0E-10 | IPR027417 |
| PRINTS | PR00364 | Disease resistance protein signature | 187 | 202 | 2.5E-10 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 420 | 436 | 2.5E-10 | - |
| Coils | Coil | Coil | 33 | 99 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G61190.4 | - | 0 |
| RefSeq | XP_031255418.1 | probable disease resistance protein At4g27220 [Pistacia vera] | 0 |
| O22727 | Probable disease resistance protein At1g61190 OS=Arabidopsis thaliana OX=3702 GN=At1g61190 PE=3 SV=1 | 0 | |
| TrEMBL | A0A067DPT4 | AAA domain-containing protein (Fragment) OS=Citrus sinensis OX=2711 GN=CISIN_1g037851mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Anacardiaceae | Pistacia vera | 40 | pistato.v30030420, pistato.v30098710, pistato.v30098730 ... |