Basic Information
Locus ID:
pistato.v30094120
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
non-specific phospholipase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr13 | 25845226 | 25849480 | - | pistato.v30094120 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.46 | 93,788.01 Da | 51.80 | 76.73 | -0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16454 | RING-H2_PA-TM-RING | 133 | 176 | 2.85556E-18 | - |
| Pfam | PF13639 | Ring finger domain | 133 | 176 | 3.6E-13 | IPR001841 |
| Pfam | PF04185 | Phosphoesterase family | 326 | 692 | 2.2E-105 | IPR007312 |
| SUPERFAMILY | SSF57850 | RING/U-box | 128 | 195 | 3.28E-22 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 109 | 184 | 2.5E-21 | IPR013083 |
| Gene3D | G3DSA:3.40.720.10 | Alkaline Phosphatase, subunit A | 316 | 509 | 6.3E-30 | IPR017850 |
| Gene3D | G3DSA:3.40.720.10 | Alkaline Phosphatase, subunit A | 552 | 738 | 1.4E-49 | IPR017850 |
| SMART | SM00184 | ring_2 | 134 | 175 | 6.0E-8 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 134 | 176 | 12.976127 | IPR001841 |
Gene Ontology
KEGG Pathway
Pathway:
ko00562 (Inositol phosphate metabolism)
map00562 (Inositol phosphate metabolism)
ko00564 (Glycerophospholipid metabolism)
map00564 (Glycerophospholipid metabolism)
ko00565 (Ether lipid metabolism)
map00565 (Ether lipid metabolism)
ko01100 (Metabolic pathways)
map01100 (Metabolic pathways)
ko01110 (Biosynthesis of secondary metabolites)
map01110 (Biosynthesis of secondary metabolites)
ko02024 (Quorum sensing)
map02024 (Quorum sensing)
Reaction:
R01312 (Phosphatidylcholine + H2O <=> 1,2-Diacyl-sn-glycerol + Choline phosphate)
R02027 (Phosphatidylglycerol + H2O <=> 1,2-Diacyl-sn-glycerol + sn-Glycerol 3-phosphate)
R02052 (Phosphatidylethanolamine + H2O <=> 1,2-Diacyl-sn-glycerol + Ethanolamine phosphate)
R03332 (1-Phosphatidyl-D-myo-inositol + H2O <=> Inositol 1-phosphate + 1,2-Diacyl-sn-glycerol)
R07381 (O-1-Alk-1-enyl-2-acyl-sn-glycero-3-phosphoethanolamine + H2O <=> 1-Alkenyl-2-acylglycerol + Ethanolamine phosphate)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G03520.1 | non-specific phospholipase C3. Lysophosphatidic acid phosphatase highly expressed during phosphate starvation and abiotic stresses. Role in lipid synthesis. | 0 |
| RefSeq | XP_031255727.1 | non-specific phospholipase C3-like [Pistacia vera] | 0 |
| Q9SRQ6 | Non-specific phospholipase C3 OS=Arabidopsis thaliana OX=3702 GN=NPC3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2H5NST8 | Non-specific phospholipase C4 OS=Citrus unshiu OX=55188 GN=CUMW_072590 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology