Basic Information
Locus ID:
pistato.v30092640
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
riboflavin kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr13 | 21670784 | 21674889 | + | pistato.v30092640 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.41 | 42,194.05 Da | 45.98 | 95.43 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01687 | Riboflavin kinase | 238 | 363 | 5.1E-39 | IPR015865 |
| Pfam | PF13419 | Haloacid dehalogenase-like hydrolase | 14 | 193 | 9.3E-28 | IPR041492 |
| SUPERFAMILY | SSF56784 | HAD-like | 12 | 223 | 6.14E-46 | IPR036412 |
| SUPERFAMILY | SSF82114 | Riboflavin kinase-like | 238 | 377 | 5.45E-41 | IPR023465 |
| Gene3D | G3DSA:3.40.50.1000 | - | 14 | 213 | 2.6E-58 | IPR023214 |
| Gene3D | G3DSA:1.10.150.240 | Putative phosphatase; domain 2 | 25 | 92 | 2.6E-58 | IPR023198 |
| Gene3D | G3DSA:2.40.30.30 | - | 226 | 381 | 1.2E-53 | IPR023465 |
| SMART | SM00904 | Flavokinase_2 | 234 | 364 | 1.2E-28 | IPR015865 |
| TIGRFAM | TIGR01509 | HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 | 92 | 193 | 3.0E-16 | IPR006439 |
| PRINTS | PR00413 | Haloacid dehalogenase/epoxide hydrolase family signature | 105 | 118 | 2.9E-9 | IPR006439 |
| PRINTS | PR00413 | Haloacid dehalogenase/epoxide hydrolase family signature | 155 | 175 | 2.9E-9 | IPR006439 |
| PRINTS | PR00413 | Haloacid dehalogenase/epoxide hydrolase family signature | 11 | 22 | 2.9E-9 | IPR006439 |
| PRINTS | PR00413 | Haloacid dehalogenase/epoxide hydrolase family signature | 137 | 153 | 2.9E-9 | IPR006439 |
| SFLD | SFLDG01129 | C1.5: HAD, Beta-PGM, Phosphatase Like | 13 | 217 | 2.8E-40 | - |
| SFLD | SFLDG01135 | C1.5.6: HAD, Beta-PGM, Phosphatase Like | 13 | 217 | 2.8E-40 | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G21470.1 | riboflavin kinase/FMN hydrolase. Bifunctional enzyme that catalyzes hydrolysis of FMN to riboflavin, and phosphorylation of riboflavin to FMN. | 0 |
| RefSeq | XP_031276765.1 | bifunctional riboflavin kinase/FMN phosphatase [Pistacia vera] | 0 |
| Q84MD8 | Bifunctional riboflavin kinase/FMN phosphatase OS=Arabidopsis thaliana OX=3702 GN=FHY PE=1 SV=1 | 0 | |
| TrEMBL | A0A5C7GR56 | riboflavin kinase OS=Acer yangbiense OX=1000413 GN=EZV62_026585 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg13860 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_39 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah008086 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_8g181640 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg10388, Sbi_jg47999 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg22200 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00023934 |
| Amaranthaceae | Suaeda glauca | 3 | Sgl45760, Sgl45762, Sgl50505 |
| Amaranthaceae | Chenopodium album | 6 | gene:ENSEOMG00000010284, gene:ENSEOMG00000011778 ... |
| Amaranthaceae | Chenopodium quinoa | 3 | CQ.Regalona.r1.4AG0019540, CQ.Regalona.r1.4BG0019860 ... |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30092640 |
| Apiaceae | Apium graveolens | 2 | Ag6G00976, Ag7G00679 |
| Arecaceae | Cocos nucifera | 1 | COCNU_07G009060 |
| Arecaceae | Phoenix dactylifera | 3 | gene-LOC103702887, gene-LOC103707307, gene-LOC103722147 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_04.236.V1.1 |
| Asteraceae | Flaveria trinervia | 2 | Ftri15G17673, Ftri18G03922 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT4G21470.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10025469m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp7g19590.v2.2 |
| Brassicaceae | Brassica nigra | 2 | BniB03g039960.2N, BniB05g015650.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq04G1466 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl04G1630 |
| Cymodoceaceae | Cymodocea nodosa | 2 | gene.Cymno03g06550, gene.Cymno17g02330 |
| Dunaliellaceae | Dunaliella salina | 1 | Dusal.0543s00004.v1.0 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate05g17850 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-987 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG12.1031 |
| Plantaginaceae | Plantago ovata | 2 | Pov_00005782, Pov_00024131 |
| Plumbaginaceae | Limonium bicolor | 3 | Lb2G14285, Lb3G21051, Lb4G24946 |
| Poaceae | Echinochloa crus-galli | 3 | AH01.1841, BH01.2155, CH01.2250 |
| Poaceae | Eleusine coracana subsp. coracana | 4 | gene-QOZ80_2AG0127050, gene-QOZ80_2BG0182610 ... |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.1HG0040860.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_011401 |
| Poaceae | Oryza coarctata | 2 | Oco19G005570, Oco20G005490 |
| Poaceae | Oryza sativa | 2 | LOC_Os10g14814.1, LOC_Os10g32730.1 |
| Poaceae | Paspalum vaginatum | 2 | gene-BS78_01G212200, gene-BS78_08G004400 |
| Poaceae | Puccinellia tenuiflora | 5 | Pt_Chr0304110, Pt_Chr0405276, Pt_Chr0502525, Pt_Chr0700252 ... |
| Poaceae | Sporobolus alterniflorus | 4 | Chr06G013270, Chr0G002480, Chr0G003580, Chr24G012360 |
| Poaceae | Thinopyrum elongatum | 1 | Tel1E01G275900 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC1AG022250, gene_TRIDC1BG027070 |
| Poaceae | Triticum aestivum | 3 | TraesCS1A02G146600.1, TraesCS1B02G164900.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb278020_P003 |
| Poaceae | Zoysia japonica | 2 | nbis-gene-19267, nbis-gene-56437 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g16156 |
| Portulacaceae | Portulaca oleracea | 4 | evm.TU.LG01.1690, evm.TU.LG13.991, evm.TU.LG14.927 ... |
| Posidoniaceae | Posidonia oceanica | 2 | gene.Posoc02g15900, gene.Posoc10g06660 |
| Rhizophoraceae | Bruguiera sexangula | 2 | evm.TU.Scaffold_12_RagTag.915, evm.TU.Scaffold_13_RagTag.161 |
| Rhizophoraceae | Carallia pectinifolia | 3 | nbisL1-mrna-23834, nbisL1-mrna-29555, nbisL1-mrna-29878 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-9738 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-21635 |
| Rhizophoraceae | Kandelia candel | 2 | evm.TU.utg000015l.105, evm.TU.utg000027l.83 |
| Rhizophoraceae | Kandelia obovata | 2 | Maker00015594, Maker00017436 |
| Rhizophoraceae | Rhizophora apiculata | 2 | nbisL1-mrna-10662, nbisL1-mrna-5991 |
| Rhizophoraceae | Rhizophora mangle | 2 | nbisL1-mrna-16938, nbisL1-mrna-23903 |
| Salicaceae | Populus euphratica | 2 | populus_peu14791, populus_peu32466 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132622454 |
| Solanaceae | Solanum chilense | 1 | SOLCI000110500 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107011963 |
| Tamaricaceae | Reaumuria soongarica | 1 | STRG.11214_chr05_+ |
| Tamaricaceae | Tamarix chinensis | 1 | TC07G2278 |
| Zosteraceae | Zostera marina | 1 | Zosma04g25920.v3.1 |