Basic Information
Locus ID:
pistato.v30090820
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr13 | 16491477 | 16494628 | + | pistato.v30090820 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.08 | 111,920.24 Da | 34.29 | 102.85 | -0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 26 | 72 | 7.6E-8 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 532 | 591 | 8.8E-9 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 711 | 981 | 1.7E-48 | IPR000719 |
| Pfam | PF00560 | Leucine Rich Repeat | 508 | 530 | 1.8 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 365 | 384 | 1.5 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 255 | 598 | 7.85E-73 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 702 | 984 | 6.42E-73 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 50 | 355 | 7.14E-54 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 297 | 363 | 1.2E-16 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 187 | 285 | 2.8E-33 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 364 | 627 | 7.8E-77 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 792 | 1012 | 3.0E-59 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 709 | 791 | 4.4E-19 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 26 | 186 | 7.4E-40 | IPR032675 |
| SMART | SM00220 | serkin_6 | 709 | 984 | 5.9E-39 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 434 | 458 | 83.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 338 | 362 | 130.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 122 | 146 | 300.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 194 | 218 | 18.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 266 | 290 | 44.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 554 | 578 | 76.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 709 | 991 | 39.085468 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 715 | 739 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 834 | 846 | - | IPR008271 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 554 | 567 | 3.9E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 509 | 522 | 3.9E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G08590.1 | Leucine-rich receptor-like protein kinase family protein. similar to CLV1-like leucine rich repeat transmembrane receptor-like protein kinase (Ipomoea nil) (U77888) | 0 |
| RefSeq | XP_031283851.1 | leucine-rich repeat receptor-like protein kinase PXL1 [Pistacia vera] | 0 |
| Q9FRS6 | Leucine-rich repeat receptor-like protein kinase PXL1 OS=Arabidopsis thaliana OX=3702 GN=PXL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2H5NT34 | Protein kinase domain-containing protein OS=Citrus unshiu OX=55188 GN=CUMW_073310 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology