Basic Information
Locus ID:
pistato.v30089790
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
G-type lectin S-receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr13 | 14630293 | 14634023 | - | pistato.v30089790 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.26 | 61,098.26 Da | 33.63 | 94.69 | 0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06899 | lectin_legume_LecRK_Arcelin_ConA | 24 | 261 | 6.93038E-93 | IPR001220 |
| Pfam | PF00139 | Legume lectin domain | 23 | 269 | 5.8E-68 | IPR001220 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 313 | 374 | 5.5E-7 | IPR001245 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 23 | 276 | 1.17E-68 | IPR013320 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 295 | 476 | 8.38E-26 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 377 | 470 | 9.0E-8 | - |
| Gene3D | G3DSA:2.60.120.200 | - | 21 | 268 | 6.0E-66 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 285 | 376 | 1.4E-24 | - |
| SMART | SM00219 | tyrkin_6 | 310 | 489 | 9.4E-4 | IPR020635 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 310 | 556 | 11.142552 | IPR000719 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G29050.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | XP_031283728.1 | L-type lectin-domain containing receptor kinase S.4-like isoform X5 [Pistacia vera] | 0 |
| Q9SZD5 | L-type lectin-domain containing receptor kinase V.9 OS=Arabidopsis thaliana OX=3702 GN=LECRK59 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8X8BZR2 | Uncharacterized protein OS=Populus tomentosa OX=118781 GN=POTOM_062199 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Anacardiaceae | Pistacia vera | 2 | pistato.v30089770, pistato.v30089790 |