Basic Information
Locus ID:
pistato.v30089770
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
G-type lectin S-receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr13 | 14601931 | 14605094 | - | pistato.v30089770 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.74 | 48,126.48 Da | 42.59 | 97.93 | -0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06899 | lectin_legume_LecRK_Arcelin_ConA | 1 | 159 | 4.45103E-70 | IPR001220 |
| Pfam | PF00139 | Legume lectin domain | 1 | 169 | 1.6E-49 | IPR001220 |
| Pfam | PF11883 | Domain of unknown function (DUF3403) | 391 | 435 | 3.2E-7 | IPR021820 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 211 | 293 | 1.2E-14 | IPR001245 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 1 | 173 | 3.12E-49 | IPR013320 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 193 | 407 | 1.09E-36 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 280 | 387 | 9.6E-10 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 172 | 279 | 4.5E-37 | - |
| Gene3D | G3DSA:2.60.120.200 | - | 1 | 167 | 6.3E-48 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 208 | 435 | 12.65489 | IPR000719 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G55550.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | XP_031283728.1 | L-type lectin-domain containing receptor kinase S.4-like isoform X5 [Pistacia vera] | 0 |
| Q9M2S4 | L-type lectin-domain containing receptor kinase S.4 OS=Arabidopsis thaliana OX=3702 GN=LECRKS4 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0D2VXU4 | non-specific serine/threonine protein kinase OS=Gossypium raimondii OX=29730 GN=B456_012G105900 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Anacardiaceae | Pistacia vera | 2 | pistato.v30089770, pistato.v30089790 |