Basic Information
Locus ID:
pistato.v30086980
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Disease resistance protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr13 | 9279350 | 9289557 | + | pistato.v30086980 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.67 | 246,285.81 Da | 39.53 | 102.39 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00009 | AAA | 153 | 286 | 0.00363111 | - |
| Pfam | PF00931 | NB-ARC domain | 1452 | 1685 | 1.1E-44 | IPR002182 |
| Pfam | PF00931 | NB-ARC domain | 159 | 371 | 1.7E-43 | IPR002182 |
| SUPERFAMILY | SSF52058 | L domain-like | 467 | 906 | 4.42E-30 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 1760 | 2135 | 2.55E-31 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 1059 | 1268 | 1.96E-15 | - |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 145 | 406 | 3.54E-49 | IPR027417 |
| SUPERFAMILY | SSF52047 | RNI-like | 889 | 1018 | 4.32E-5 | - |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 1449 | 1699 | 1.02E-46 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 1437 | 1597 | 1.4E-28 | IPR027417 |
| Gene3D | G3DSA:1.10.8.430 | - | 1599 | 1687 | 2.3E-16 | IPR042197 |
| Gene3D | G3DSA:3.40.50.300 | - | 135 | 300 | 2.4E-31 | IPR027417 |
| Gene3D | G3DSA:1.10.8.430 | - | 306 | 394 | 4.8E-15 | IPR042197 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1783 | 2147 | 1.2E-32 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 883 | 1042 | 3.5E-11 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1047 | 1134 | 9.5E-7 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1140 | 1283 | 2.4E-7 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 665 | 882 | 1.2E-11 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 487 | 664 | 6.4E-23 | IPR032675 |
| SMART | SM00382 | AAA_5 | 1464 | 1623 | 0.32 | IPR003593 |
| SMART | SM00382 | AAA_5 | 171 | 306 | 1.8E-6 | IPR003593 |
| PRINTS | PR00364 | Disease resistance protein signature | 1633 | 1647 | 1.0E-18 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 1467 | 1482 | 1.0E-18 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 1909 | 1925 | 1.0E-18 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 1540 | 1554 | 1.0E-18 | - |
| Coils | Coil | Coil | 27 | 54 | - | - |
| Coils | Coil | Coil | 1321 | 1359 | - | - |
| Coils | Coil | Coil | 747 | 767 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G27190.1 | NB-ARC domain-containing disease resistance protein. | 0 |
| RefSeq | XP_031276401.1 | probable disease resistance protein At4g27220 isoform X1 [Pistacia vera] | 0 |
| Q9T048 | Disease resistance protein At4g27190 OS=Arabidopsis thaliana OX=3702 GN=At4g27190 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6N2MET8 | AAA domain-containing protein (Fragment) OS=Salix viminalis OX=40686 GN=SVIM_LOCUS358158 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology