Basic Information
Locus ID:
pistato.v30086440
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Blue copper
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr13 | 8685638 | 8686274 | - | pistato.v30086440 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.81 | 16,601.87 Da | 30.89 | 78.37 | 0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd04216 | Phytocyanin | 24 | 121 | 2.08499E-44 | - |
| Pfam | PF02298 | Plastocyanin-like domain | 34 | 115 | 1.8E-24 | IPR003245 |
| SUPERFAMILY | SSF49503 | Cupredoxins | 23 | 122 | 6.91E-34 | IPR008972 |
| Gene3D | G3DSA:2.60.40.420 | - | 22 | 126 | 1.1E-35 | IPR008972 |
| ProSiteProfiles | PS51485 | Phytocyanin domain profile. | 24 | 123 | 38.544121 | IPR003245 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G17675.1 | Cupredoxin superfamily protein. Encodes a Plantacyanin/Basic blue family protein | 0 |
| RefSeq | XP_044500281.1 | blue copper protein 1b-like [Mangifera indica] | 0 |
| G7L0H3 | Blue copper protein 1a OS=Medicago truncatula OX=3880 GN=MTR_7g086140 PE=2 SV=1 | 0 | |
| TrEMBL | V4VU30 | Phytocyanin domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10023890mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology