Basic Information
Locus ID:
pistato.v30086130
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
F-box Kelch-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr13 | 7805828 | 7806868 | - | pistato.v30086130 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.17 | 38,098.69 Da | 41.03 | 73.96 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01344 | Kelch motif | 120 | 159 | 2.1E-6 | IPR006652 |
| Pfam | PF00646 | F-box domain | 10 | 44 | 8.3E-5 | IPR001810 |
| Pfam | PF01344 | Kelch motif | 164 | 206 | 8.8E-11 | IPR006652 |
| SUPERFAMILY | SSF117281 | Kelch motif | 84 | 305 | 1.7E-35 | IPR015915 |
| SUPERFAMILY | SSF81383 | F-box domain | 9 | 59 | 1.7E-8 | IPR036047 |
| Gene3D | G3DSA:2.120.10.80 | - | 50 | 307 | 7.0E-35 | IPR015915 |
| SMART | SM00612 | kelc_smart | 173 | 220 | 1.3E-8 | IPR006652 |
| SMART | SM00612 | kelc_smart | 124 | 172 | 3.0E-4 | IPR006652 |
| SMART | SM00256 | fbox_2 | 13 | 53 | 0.001 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G44130.1 | Galactose oxidase/kelch repeat superfamily protein. | 0 |
| RefSeq | XP_031269175.1 | F-box/kelch-repeat protein At2g44130-like [Pistacia vera] | 0 |
| O80582 | F-box/kelch-repeat protein At2g44130 OS=Arabidopsis thaliana OX=3702 GN=At2g44130 PE=2 SV=2 | 0 | |
| TrEMBL | A0A067FII6 | F-box domain-containing protein OS=Citrus sinensis OX=2711 GN=CISIN_1g019345mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology