Basic Information
Locus ID:
pistato.v30085250
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Belongs to the NPH3 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr13 | 5990631 | 5991541 | - | pistato.v30085250 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.78 | 26,456.07 Da | 38.53 | 105.97 | -0.14 |
Protein Domain:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G64330.3 | - | 0 |
| RefSeq | XP_006433288.2 | root phototropism protein 3 [Citrus clementina] | 0 |
| Q9FMF5 | Root phototropism protein 3 OS=Arabidopsis thaliana OX=3702 GN=RPT3 PE=1 SV=2 | 0 | |
| TrEMBL | A0A5C7IA35 | Root phototropism protein 3-like OS=Acer yangbiense OX=1000413 GN=EZV62_006827 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Aizoaceae | Mesembryanthemum crystallinum | 2 | gene_10452, gene_24916 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah005926 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_4g081670 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000008631, gene:ENSEOMG00000028674 ... |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.4AG0009380, CQ.Regalona.r1.4BG0009520 |
| Anacardiaceae | Pistacia vera | 2 | pistato.v30085250, pistato.v30086370 |
| Apiaceae | Apium graveolens | 1 | Ag1G00457 |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq06G1230 |
| Casuarinaceae | Casuarina glauca | 2 | Cgl05G2420, Cgl06G1283 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG03.2407 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG08.628, evm.TU.LG22.1221 |
| Salicaceae | Populus euphratica | 1 | populus_peu15768 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132645883 |
| Solanaceae | Solanum chilense | 1 | SOLCI000021300 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107005985 |