Basic Information
Locus ID:
pistato.v30082680
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr13 | 2455717 | 2487418 | - | pistato.v30082680 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.34 | 292,110.94 Da | 42.76 | 100.53 | -0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 343 | 567 | 8.6E-14 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 88 | 260 | 1.3E-12 | IPR000719 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 1649 | 1871 | 8.1E-7 | IPR001245 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 1486 | 1597 | 3.4E-9 | IPR001245 |
| Pfam | PF00069 | Protein kinase domain | 1175 | 1418 | 2.7E-13 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 2311 | 2551 | 6.4E-15 | IPR000719 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 1979 | 2212 | 6.2E-12 | IPR001245 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 904 | 1083 | 1.5E-12 | IPR001245 |
| Pfam | PF00069 | Protein kinase domain | 608 | 835 | 1.6E-9 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 87 | 264 | 5.55E-25 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1615 | 1883 | 7.51E-26 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 2289 | 2559 | 4.84E-33 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1150 | 1427 | 1.73E-31 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1943 | 2219 | 9.39E-34 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1458 | 1603 | 2.56E-24 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 906 | 1083 | 5.27E-23 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 343 | 571 | 4.76E-32 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 580 | 839 | 1.93E-29 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1907 | 2009 | 5.1E-10 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1106 | 1217 | 2.1E-11 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 2352 | 2562 | 8.9E-31 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1611 | 1680 | 3.2E-5 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1686 | 1899 | 1.3E-18 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 892 | 1104 | 1.9E-30 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 79 | 287 | 1.0E-31 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1222 | 1447 | 5.4E-28 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 2017 | 2236 | 8.4E-28 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1456 | 1610 | 2.8E-21 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 584 | 846 | 3.5E-25 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 340 | 578 | 1.6E-30 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 2249 | 2346 | 1.4E-9 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1139 | 1424 | 15.877442 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 267 | 16.386267 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1434 | 1878 | 12.103664 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 766 | 1095 | 15.48169 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1902 | 2216 | 16.951626 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 261 | 580 | 17.206038 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 2269 | 2559 | 16.796152 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G57730.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_031265810.1 | non-functional pseudokinase ZED1-like [Pistacia vera] | 0 |
| Q8VZF4 | Serine/threonine-protein kinase ZRK3 OS=Arabidopsis thaliana OX=3702 GN=ZRK3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6N2LXN5 | Cullin domain-containing protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS290111 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Atriplex hortensis | 1 | Ah031726 |
| Amaranthaceae | Suaeda glauca | 1 | Sgl54871 |
| Amaranthaceae | Chenopodium album | 1 | gene:ENSEOMG00000013396 |
| Amaranthaceae | Chenopodium quinoa | 3 | CQ.Regalona.r1.2AG0000610, CQ.Regalona.r1.2BG0001920 ... |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30082680 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl06G0421 |
| Rhizophoraceae | Bruguiera sexangula | 2 | evm.TU.Scaffold_15_RagTag.538, evm.TU.Scaffold_15_RagTag.541 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-26696 |
| Rhizophoraceae | Ceriops zippeliana | 2 | nbisL1-mrna-15826, nbisL1-mrna-15827 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000001l.269 |
| Rhizophoraceae | Kandelia obovata | 3 | Maker00002464, Maker00002536, Maker00002600 |