Basic Information
Locus ID:
pistato.v30081890
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
LRR-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr13 | 1769367 | 1776276 | + | pistato.v30081890 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.47 | 77,370.20 Da | 41.03 | 97.29 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 188 | 225 | 4.5E-7 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 186 | 232 | 2.75E-12 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 260 | 438 | 5.34E-7 | - |
| Gene3D | G3DSA:1.20.1280.50 | - | 177 | 226 | 3.3E-7 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 303 | 542 | 4.7E-6 | IPR032675 |
| SMART | SM00256 | fbox_2 | 192 | 232 | 3.0E-5 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 186 | 240 | 8.888098 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G02910.2 | F-box/RNI-like superfamily protein. | 0 |
| RefSeq | XP_031269429.1 | F-box/LRR-repeat protein At1g06630-like [Pistacia vera] | 0 |
| Q9LYZ4 | F-box/LRR-repeat protein At5g02910 OS=Arabidopsis thaliana OX=3702 GN=At5g02910 PE=2 SV=1 | 0 | |
| TrEMBL | V4T217 | F-box domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10000694mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology