Basic Information
Locus ID:
pistato.v30081860
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
LRR-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr13 | 1712308 | 1714539 | + | pistato.v30081860 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.74 | 45,199.66 Da | 42.78 | 107.80 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 10 | 46 | 1.2E-5 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 8 | 51 | 2.22E-11 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 76 | 307 | 1.45E-7 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 71 | 357 | 1.0E-5 | IPR032675 |
| Gene3D | G3DSA:1.20.1280.50 | - | 2 | 48 | 2.1E-6 | - |
| ProSiteProfiles | PS50181 | F-box domain profile. | 8 | 43 | 8.782121 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G60400.1 | F-box/RNI-like superfamily protein. | 0 |
| RefSeq | XP_031269425.1 | F-box/FBD/LRR-repeat protein At3g26920-like [Pistacia vera] | 0 |
| Q1PFI4 | F-box protein At1g60400 OS=Arabidopsis thaliana OX=3702 GN=At1g60400 PE=2 SV=2 | 0 | |
| TrEMBL | V4T217 | F-box domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10000694mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology