Basic Information
Locus ID:
pistato.v30081140
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
PAPA-1-like family protein zinc finger (HIT type) family protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr13 | 1004689 | 1008288 | + | pistato.v30081140 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.16 | 64,416.27 Da | 52.80 | 59.34 | -0.92 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF04795 | PAPA-1-like conserved region | 436 | 520 | 2.0E-19 | IPR006880 |
| Pfam | PF04438 | HIT zinc finger | 537 | 568 | 1.4E-7 | IPR007529 |
| SMART | SM01406 | PAPA_1_2 | 436 | 521 | 4.9E-30 | IPR006880 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 92 | 124 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 181 | 197 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 245 | 272 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 397 | 428 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 236 | 272 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 167 | 197 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 397 | 413 | - | - |
| Coils | Coil | Coil | 474 | 494 | - | - |
| Coils | Coil | Coil | 428 | 462 | - | - |
Gene Ontology
Cellular Component:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G56460.1 | HIT zinc finger ;PAPA-1-like conserved region. | 0 |
| RefSeq | XP_031266494.1 | uncharacterized protein LOC116124871 [Pistacia vera] | 0 |
| TrEMBL | A0A067GPW3 | PAPA-1 domain-containing protein OS=Citrus sinensis OX=2711 GN=CISIN_1g009039mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology